STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJX92273.1Pyrroloquinoline quinone biosynthesis protein PqqE; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)    
Predicted Functional Partners:
OJX95866.1
7-cyano-7-deazaguanine synthase QueC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.983
OJX93225.1
7-cyano-7-deazaguanine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.981
OJX88652.1
NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.964
OJX92272.1
valine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
OJX92649.1
tRNA guanosine(34) transglycosylase Tgt; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.775
OJX89969.1
Deoxyuridine 5'-triphosphate nucleotidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.645
OJX87918.1
GTP cyclohydrolase I FolE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.632
OJX96772.1
GTP cyclohydrolase I FolE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.632
OJX92409.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.608
OJX92410.1
MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.586
Your Current Organism:
Novosphingobium sp. 63713
NCBI taxonomy Id: 1895900
Other names: N. sp. 63-713, Novosphingobium sp. 63-713
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