STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJX28577.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (599 aa)    
Predicted Functional Partners:
OJX30942.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.645
OJX32290.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
OJX33157.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.512
OJX31186.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.512
OJX31719.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.512
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.512
OJX33087.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.512
OJX29317.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.512
OJX30752.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.453
OJX30493.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
   0.444
Your Current Organism:
Chryseobacterium sp. 369
NCBI taxonomy Id: 1895905
Other names: C. sp. 36-9, Chryseobacterium sp. 36-9, Epilithonimonas sp. 36-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.