STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718595_00485Unannotated protein. (258 aa)    
Predicted Functional Partners:
GCA_000718595_00486
Unannotated protein.
       0.799
GCA_000718595_05848
Unannotated protein.
  
 
  0.720
GCA_000718595_00487
Unannotated protein.
  
    0.701
GCA_000718595_06337
Unannotated protein.
  
  0.689
GCA_000718595_04109
Unannotated protein.
   
  0.688
GCA_000718595_06447
Unannotated protein.
  
 0.678
GCA_000718595_03448
Unannotated protein.
    
  0.676
GCA_000718595_03651
Unannotated protein.
    
  0.676
GCA_000718595_04580
Unannotated protein.
    
  0.676
GCA_000718595_05375
Unannotated protein.
    
  0.676
Your Current Organism:
Streptomyces bikiniensis
NCBI taxonomy Id: 1896
Other names: AS 4.569, ATCC 11062, Actinomyces bikiniensis, CBS 412.54, DSM 40581, HUT 6084, IFO 14598, IMET 41362, ISP 5581, JCM 4011, KCTC 9172, NBRC 14598, NRRL B-2690, NRRL-ISP 5581, RIA 471, RIA 74, S. bikiniensis, VKM Ac-999
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.