STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH36536.1Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)    
Predicted Functional Partners:
AOH35626.1
Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
tatA
Preprotein translocase subunit SecA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.701
AOH36535.1
Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.650
AOH34993.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.565
AOH36534.1
Inorganic phosphate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.523
AOH36533.1
Pit accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.510
AOH35284.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.462
AOH36745.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.462
AOH36386.1
HflK protein; HflC and HflK could encode or regulate a protease.
    
  0.454
AOH36387.1
HflC protein; HflC and HflK could regulate a protease.
    
  0.454
Your Current Organism:
Luteimonas sp. JM171
NCBI taxonomy Id: 1896164
Other names: L. sp. JM171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.