STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO34352.1Polymer-forming protein. (117 aa)    
Predicted Functional Partners:
SIO34362.1
Peptidase family M23.
 
   
 0.838
SIO34377.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
     
 0.802
rsmG-2
16S rRNA (guanine527-N7)-methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
   
   0.557
SIO34388.1
Chromosome segregation ATPase.
     
 0.545
SIO04832.1
Outer membrane protein OmpA.
  
     0.428
SIO11520.1
OmpA family protein.
  
     0.420
Your Current Organism:
Fibrobacter sp. UWB11
NCBI taxonomy Id: 1896202
Other names: F. sp. UWB11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.