STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO44954.1Hypothetical protein. (267 aa)    
Predicted Functional Partners:
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
       0.791
SIO44943.1
Periplasmic chaperone for outer membrane proteins SurA.
       0.790
SIO44966.1
RNA helicase HrpA.
   
   0.677
SIO44978.1
Hypothetical protein.
       0.637
SIO44990.1
Acyl-CoA hydrolase.
       0.459
SIO00866.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 
 0.443
Your Current Organism:
Fibrobacter sp. UWB11
NCBI taxonomy Id: 1896202
Other names: F. sp. UWB11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.