STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL27579.1Uncharacterized phage protein gp47/JayE. (394 aa)    
Predicted Functional Partners:
SHK70383.1
Hypothetical protein.
  
 
 0.966
SHK70138.1
Hypothetical protein.
  
 
 0.963
SHK70494.1
Hypothetical protein.
   
 
 0.956
SHL27700.1
Mu-like prophage tail protein gpP.
 
    0.951
SHK70311.1
Rhs element Vgr protein.
   
   0.934
SHK21238.1
LysM domain-containing protein.
  
 
 0.921
SHK70273.1
Hypothetical protein.
  
 
 0.921
SHL27741.1
DNA circularisation protein N-terminus.
 
    0.914
SHL27660.1
Phage baseplate assembly protein V.
 
    0.907
SHK70171.1
Conserved hypothetical phage tail region protein.
   
 
 0.884
Your Current Organism:
Fibrobacter sp. UWH6
NCBI taxonomy Id: 1896212
Other names: F. sp. UWH6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.