STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL89809.1RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (258 aa)    
Predicted Functional Partners:
SHL07756.1
Putative ABC transport system permease protein.
 
 
 0.921
SHL89767.1
Hypothetical protein.
       0.773
SHL07723.1
Putative ABC transport system ATP-binding protein.
  
 0.729
SHL53109.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
  0.721
SHL60767.1
Outer membrane protein.
  
  0.716
SHL57134.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
  0.708
SHL90527.1
Outer membrane efflux protein.
  
  0.687
SHL39872.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
  0.686
SHL03189.1
CotH protein.
   
  0.645
SHL34618.1
Hypothetical protein.
   
  0.645
Your Current Organism:
Fibrobacter sp. UWT2
NCBI taxonomy Id: 1896224
Other names: F. sp. UWT2
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