STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKZ73813.1Stage III sporulation protein AF; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (219 aa)    
Predicted Functional Partners:
OKZ73811.1
Stage III sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.992
OKZ73812.1
Stage III sporulation protein AE; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.989
OKZ73814.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.978
OKZ73809.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.969
OKZ73810.1
Stage III sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.939
OKZ73815.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.911
OKZ73562.1
Stage II sporulation protein M; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.786
OKZ73790.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.659
OKZ73791.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.593
OKZ75215.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.503
Your Current Organism:
Clostridium sp. 2622
NCBI taxonomy Id: 1896978
Other names: C. sp. 26_22, Clostridium sp. 26_22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.