STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLA22819.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)    
Predicted Functional Partners:
OLA22820.1
Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.721
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
    
  0.637
OLA24005.1
Redox-regulated ATPase YchF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.623
OLA23939.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.599
OLA22822.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
    0.588
OLA22823.1
NAD(P)H-hydrate dehydratase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.588
OLA25116.1
Trigger factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.569
rpmF
DNA-binding protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.
   
    0.560
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
  
    0.542
rplQ
DNA-directed RNA polymerase subunit alpha; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.533
Your Current Organism:
Dorea sp. 428
NCBI taxonomy Id: 1896999
Other names: D. sp. 42_8, Dorea sp. 42_8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.