STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLA59601.1SpoIVB peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)    
Predicted Functional Partners:
OLA59678.1
Sporulation transcription factor Spo0A; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.849
OLA58747.1
Sporulation transcription factor Spo0A; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.838
OLA61327.1
Clp protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.797
OLA61912.1
Sporulation transcriptional regulator SpoIIID; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.782
OLA59051.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.780
OLA60259.1
Stage V sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.777
OLA58676.1
SpoVA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.777
OLA59584.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.776
OLA58220.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.776
OLA62481.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
     0.774
Your Current Organism:
Roseburia sp. CAG1004157
NCBI taxonomy Id: 1897016
Other names: R. sp. CAG:10041_57, Roseburia sp. CAG:10041_57
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.