STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472925_00922Unannotated protein. (365 aa)    
Predicted Functional Partners:
GCA_000472925_00923
Unannotated protein.
 
     0.885
GCA_000472925_00924
Unannotated protein.
 
   
 0.779
GCA_000472925_00927
Unannotated protein.
 
     0.773
GCA_000472925_00925
Unannotated protein.
 
     0.757
GCA_000472925_01134
Unannotated protein.
  
     0.748
GCA_000472925_03499
Unannotated protein.
  
     0.743
GCA_000472925_06124
Unannotated protein.
 
     0.737
GCA_000472925_06517
Unannotated protein.
 
     0.702
GCA_000472925_00385
Unannotated protein.
  
     0.696
GCA_000472925_05364
Unannotated protein.
  
     0.689
Your Current Organism:
Bradyrhizobium sp. Ec33
NCBI taxonomy Id: 189753
Other names: B. sp. Ec3.3, Bradyrhizobium sp. Ec3.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.