STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472925_01993Unannotated protein. (58 aa)    
Predicted Functional Partners:
GCA_000472925_00247
Unannotated protein.
  
     0.772
GCA_000472925_00827
Unannotated protein.
 
     0.607
GCA_000472925_01994
Unannotated protein.
       0.566
GCA_000472925_04189
Unannotated protein.
 
     0.506
GCA_000472925_01995
Unannotated protein.
       0.502
GCA_000472925_05559
Unannotated protein.
 
     0.487
GCA_000472925_03186
Unannotated protein.
 
     0.480
GCA_000472925_01992
Unannotated protein.
       0.474
GCA_000472925_05840
Unannotated protein.
 
     0.472
GCA_000472925_06696
Unannotated protein.
 
     0.470
Your Current Organism:
Bradyrhizobium sp. Ec33
NCBI taxonomy Id: 189753
Other names: B. sp. Ec3.3, Bradyrhizobium sp. Ec3.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.