STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472925_02041Unannotated protein. (469 aa)    
Predicted Functional Partners:
GCA_000472925_07243
Unannotated protein.
   
 0.910
GCA_000472925_07843
Unannotated protein.
  
 
 0.848
GCA_000472925_03745
Unannotated protein.
  
 0.782
GCA_000472925_01180
Unannotated protein.
 
0.710
GCA_000472925_02365
Unannotated protein.
  
 
 0.704
GCA_000472925_05607
Unannotated protein.
    
 0.695
GCA_000472925_09391
Unannotated protein.
    
 0.695
GCA_000472925_03358
Unannotated protein.
  
 
 0.664
GCA_000472925_08468
Unannotated protein.
   
 0.641
GCA_000472925_05960
Unannotated protein.
   
 0.638
Your Current Organism:
Bradyrhizobium sp. Ec33
NCBI taxonomy Id: 189753
Other names: B. sp. Ec3.3, Bradyrhizobium sp. Ec3.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.