STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472925_05054Unannotated protein. (416 aa)    
Predicted Functional Partners:
GCA_000472925_05053
Unannotated protein.
 
 
 
 0.925
GCA_000472925_05055
Unannotated protein.
     0.898
GCA_000472925_07843
Unannotated protein.
    
 0.800
GCA_000472925_02551
Unannotated protein.
    
 0.573
GCA_000472925_03243
Unannotated protein.
    
 0.569
GCA_000472925_00355
Unannotated protein.
    
 0.559
GCA_000472925_05052
Unannotated protein.
       0.550
GCA_000472925_01939
Unannotated protein.
    
 0.537
GCA_000472925_08046
Unannotated protein.
  
     0.509
GCA_000472925_00538
Unannotated protein.
  
     0.498
Your Current Organism:
Bradyrhizobium sp. Ec33
NCBI taxonomy Id: 189753
Other names: B. sp. Ec3.3, Bradyrhizobium sp. Ec3.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.