STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472925_05186Unannotated protein. (228 aa)    
Predicted Functional Partners:
GCA_000472925_05185
Unannotated protein.
       0.803
GCA_000472925_05184
Unannotated protein.
       0.618
GCA_000472925_08046
Unannotated protein.
  
     0.559
GCA_000472925_05187
Unannotated protein.
       0.542
GCA_000472925_06005
Unannotated protein.
  
     0.538
GCA_000472925_05857
Unannotated protein.
  
 
 
 0.504
GCA_000472925_01102
Unannotated protein.
  
     0.488
GCA_000472925_00538
Unannotated protein.
  
     0.486
GCA_000472925_00492
Unannotated protein.
  
     0.475
GCA_000472925_01304
Unannotated protein.
   
    0.475
Your Current Organism:
Bradyrhizobium sp. Ec33
NCBI taxonomy Id: 189753
Other names: B. sp. Ec3.3, Bradyrhizobium sp. Ec3.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.