STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472925_05597Unannotated protein. (308 aa)    
Predicted Functional Partners:
GCA_000472925_05596
Unannotated protein.
 
  
  0.938
GCA_000472925_02982
Unannotated protein.
     
 0.919
GCA_000472925_04855
Unannotated protein.
  
  
 0.829
GCA_000472925_05595
Unannotated protein.
 
  
  0.819
GCA_000472925_07157
Unannotated protein.
  
     0.767
GCA_000472925_00647
Unannotated protein.
    
  0.766
GCA_000472925_03008
Unannotated protein.
  
     0.765
GCA_000472925_04387
Unannotated protein.
  
     0.762
GCA_000472925_09211
Unannotated protein.
  
     0.762
GCA_000472925_03175
Unannotated protein.
  
     0.758
Your Current Organism:
Bradyrhizobium sp. Ec33
NCBI taxonomy Id: 189753
Other names: B. sp. Ec3.3, Bradyrhizobium sp. Ec3.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.