STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472925_05791Unannotated protein. (414 aa)    
Predicted Functional Partners:
GCA_000472925_04270
Unannotated protein.
 
 
 0.957
GCA_000472925_05811
Unannotated protein.
  
  
 
0.838
GCA_000472925_01163
Unannotated protein.
   
 0.781
GCA_000472925_01747
Unannotated protein.
   
 0.781
GCA_000472925_04747
Unannotated protein.
  
 0.744
GCA_000472925_04746
Unannotated protein.
 
  
 0.742
GCA_000472925_02832
Unannotated protein.
  
 
 0.671
GCA_000472925_06196
Unannotated protein.
  
 
 0.671
GCA_000472925_07960
Unannotated protein.
 
  
 0.658
GCA_000472925_07962
Unannotated protein.
 
 
 0.632
Your Current Organism:
Bradyrhizobium sp. Ec33
NCBI taxonomy Id: 189753
Other names: B. sp. Ec3.3, Bradyrhizobium sp. Ec3.3
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.