STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472925_06305Unannotated protein. (366 aa)    
Predicted Functional Partners:
GCA_000472925_06309
Unannotated protein.
 
   
 0.924
GCA_000472925_06306
Unannotated protein.
 
 
 
 0.911
GCA_000472925_06311
Unannotated protein.
 
     0.892
GCA_000472925_06312
Unannotated protein.
 
   
 0.886
GCA_000472925_06310
Unannotated protein.
 
     0.879
GCA_000472925_06307
Unannotated protein.
 
     0.876
GCA_000472925_06308
Unannotated protein.
     
 0.807
GCA_000472925_04953
Unannotated protein.
    
 0.600
GCA_000472925_08137
Unannotated protein.
    
 0.600
GCA_000472925_06313
Unannotated protein.
 
    
0.564
Your Current Organism:
Bradyrhizobium sp. Ec33
NCBI taxonomy Id: 189753
Other names: B. sp. Ec3.3, Bradyrhizobium sp. Ec3.3
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.