STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472925_06744Unannotated protein. (704 aa)    
Predicted Functional Partners:
GCA_000472925_08468
Unannotated protein.
  
 0.874
GCA_000472925_00607
Unannotated protein.
 
     0.850
GCA_000472925_03451
Unannotated protein.
  
  
 
0.792
GCA_000472925_08469
Unannotated protein.
    
 0.789
GCA_000472925_00195
Unannotated protein.
 
  
 0.782
GCA_000472925_03152
Unannotated protein.
 
     0.753
GCA_000472925_02221
Unannotated protein.
    
 0.742
GCA_000472925_02072
Unannotated protein.
    
  0.735
GCA_000472925_02217
Unannotated protein.
    
  0.735
GCA_000472925_03083
Unannotated protein.
    
  0.735
Your Current Organism:
Bradyrhizobium sp. Ec33
NCBI taxonomy Id: 189753
Other names: B. sp. Ec3.3, Bradyrhizobium sp. Ec3.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.