STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472925_09083Unannotated protein. (319 aa)    
Predicted Functional Partners:
GCA_000472925_07173
Unannotated protein.
  
     0.667
GCA_000472925_05027
Unannotated protein.
  
     0.639
GCA_000472925_02885
Unannotated protein.
    
 0.602
GCA_000472925_00753
Unannotated protein.
  
     0.578
GCA_000472925_00331
Unannotated protein.
  
     0.572
GCA_000472925_06406
Unannotated protein.
  
     0.558
GCA_000472925_02981
Unannotated protein.
  
     0.557
GCA_000472925_06404
Unannotated protein.
  
     0.544
GCA_000472925_04994
Unannotated protein.
    
 0.522
GCA_000472925_07331
Unannotated protein.
   
  0.521
Your Current Organism:
Bradyrhizobium sp. Ec33
NCBI taxonomy Id: 189753
Other names: B. sp. Ec3.3, Bradyrhizobium sp. Ec3.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.