STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMH33627.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. (65 aa)    
Predicted Functional Partners:
OMH33628.1
DUF1328 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.980
OMH27111.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.917
OMH33623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.770
OMH36524.1
Phospholipid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.736
OMH25541.1
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.694
OMH36191.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.692
OMH38219.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.683
OMH33742.1
Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.606
OMH32836.1
TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.606
OMH30408.1
ABC transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.601
Your Current Organism:
Motiliproteus sp. MSK221
NCBI taxonomy Id: 1897630
Other names: M. sp. MSK22-1, Motiliproteus sp. MSK22-1
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