STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMH33917.1Marine proteobacterial sortase target protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (762 aa)    
Predicted Functional Partners:
OMH33918.1
Sortase, marine proteobacterial type; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.950
OMH33915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.777
OMH33916.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OMH25252.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.607
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
    
 
 0.435
OMH33914.1
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.434
OMH32769.1
RNA 3'-terminal-phosphate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.433
Your Current Organism:
Motiliproteus sp. MSK221
NCBI taxonomy Id: 1897630
Other names: M. sp. MSK22-1, Motiliproteus sp. MSK22-1
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