STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001941685_04907Unannotated protein. (174 aa)    
Predicted Functional Partners:
GCA_001941685_01357
Unannotated protein.
  
 0.941
GCA_001941685_00663
Unannotated protein.
 0.939
GCA_001941685_01598
Unannotated protein.
 
 0.931
GCA_001941685_04906
Unannotated protein.
 0.928
GCA_001941685_05141
Unannotated protein.
 
 0.910
GCA_001941685_03441
Unannotated protein.
 0.872
GCA_001941685_01591
Unannotated protein.
 0.870
GCA_001941685_03268
Unannotated protein.
 0.869
GCA_001941685_00801
Unannotated protein.
 
 0.868
GCA_001941685_05428
Unannotated protein.
 0.826
Your Current Organism:
Pseudovibrio sp. Ab134
NCBI taxonomy Id: 1898042
Other names: P. sp. Ab134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.