STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB50034.1Nicotinamidase-related amidase. (193 aa)    
Predicted Functional Partners:
SKB49989.1
Nicotinate phosphoribosyltransferase.
  
 
 0.889
SKB55958.1
NAD-dependent deacetylase.
  
 0.847
SKB46585.1
Purine-nucleoside phosphorylase.
    
 0.839
SKB50040.1
8-oxo-dGTP diphosphatase.
  
    0.785
SKB71187.1
Selenium-dependent xanthine dehydrogenase.
    
 0.775
SKB49963.1
NAD+ synthase.
  
  
 0.753
SKB82834.1
Condensation domain-containing protein.
     
 0.668
SKB70834.1
Nicotinate-nucleotide adenylyltransferase.
    
 0.633
SKB70367.1
Anthranilate synthase component 1.
    
 0.623
SKB70096.1
3-oxoacyl-[acyl-carrier-protein] reductase.
  
 0.599
Your Current Organism:
Lachnospiraceae bacterium
NCBI taxonomy Id: 1898203
Other names: L. bacterium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.