STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB54112.15-methylthioadenosine/S-adenosylhomocysteine deaminase. (432 aa)    
Predicted Functional Partners:
SKB71187.1
Selenium-dependent xanthine dehydrogenase.
  
 
 0.859
SKB46585.1
Purine-nucleoside phosphorylase.
 
  
 0.845
SKC06467.1
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfB subunit.
    
  0.821
SKB71204.1
CO or xanthine dehydrogenase, FAD-binding subunit.
  
 
  0.805
SKB71245.1
CO or xanthine dehydrogenase, Mo-binding subunit.
  
 
 0.802
SKB81929.1
Xanthine dehydrogenase accessory factor.
  
 
  0.784
SKC01310.1
Hypoxanthine phosphoribosyltransferase.
    
 0.759
SKB92517.1
Spermidine synthase.
   
  0.748
SKB71255.1
Adenine phosphoribosyltransferase.
     
 0.731
SKC02441.1
Xanthine phosphoribosyltransferase.
     
 0.731
Your Current Organism:
Lachnospiraceae bacterium
NCBI taxonomy Id: 1898203
Other names: L. bacterium
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