STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB54153.1Rubrerythrin. (180 aa)    
Predicted Functional Partners:
SKB54144.1
Fur family transcriptional regulator, peroxide stress response regulator.
  
  
 0.806
SKB67005.1
Glutamate dehydrogenase (NADP+).
     
 0.560
SKB63446.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
  
 0.517
SKB64774.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
  
 0.501
SKB66285.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
  
 0.495
SKB99591.1
Rubredoxin.
  
  
 0.472
SKB95725.1
[FeFe] hydrogenase, group B1/B3.
 
 
 0.432
SKB45651.1
Superoxide reductase.
  
  
 0.415
SKB90291.1
Flagellar motor switch protein FliM.
    
 
 0.411
SKB46767.1
Elongation factor G.
     
 0.404
Your Current Organism:
Lachnospiraceae bacterium
NCBI taxonomy Id: 1898203
Other names: L. bacterium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.