STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB65701.1Hypothetical protein. (598 aa)    
Predicted Functional Partners:
SKB65830.1
Sugar phosphate isomerase/epimerase.
       0.661
SKB65847.1
Sugar phosphate isomerase/epimerase.
       0.661
SKB65853.1
Hypothetical protein.
       0.580
SKB65860.1
Protein of unknown function.
       0.580
SKB65693.1
Hypothetical protein.
       0.574
SKB65685.1
dTDP-4-amino-4,6-dideoxygalactose transaminase.
       0.457
SKB65614.1
EamA-like transporter family protein.
       0.410
Your Current Organism:
Lachnospiraceae bacterium
NCBI taxonomy Id: 1898203
Other names: L. bacterium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.