STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB66352.1Hypothetical protein. (354 aa)    
Predicted Functional Partners:
SKB82834.1
Condensation domain-containing protein.
  
 
 0.929
SKB66366.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.773
SKB66338.1
ABC-type multidrug transport system, ATPase and permease component.
       0.651
SKB66382.1
Choline-phosphate cytidylyltransferase.
       0.645
SKB66415.1
Lipopolysaccharide cholinephosphotransferase.
       0.588
SKB66421.1
Glycosyltransferase, GT2 family.
       0.576
SKB66326.1
Sugar phosphate isomerase/epimerase.
       0.514
SKB66329.1
Predicted dehydrogenase.
       0.514
SKB87400.1
butyryl-CoA dehydrogenase.
    
 0.475
SKB66430.1
Glycosyltransferase involved in cell wall bisynthesis.
    
  0.465
Your Current Organism:
Lachnospiraceae bacterium
NCBI taxonomy Id: 1898203
Other names: L. bacterium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.