STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB80271.1Energy-coupling factor transporter transmembrane protein EcfT. (247 aa)    
Predicted Functional Partners:
SKB80369.1
Energy-coupling factor transport system ATP-binding protein.
 0.993
SKB80391.1
Energy-coupling factor transport system substrate-specific component.
 
 
 0.985
SKB80408.1
YKOF-related Family.
 
 
 0.966
SKB79124.1
Biotin transport system substrate-specific component.
  
 0.931
SKC02208.1
Energy-coupling factor transport system ATP-binding protein.
 0.920
SKB78152.1
Energy-coupling factor transport system ATP-binding protein.
 0.903
SKB99613.1
Uncharacterized membrane protein.
  
 0.889
SKB96876.1
ECF transporter S component, folate family.
  
 0.854
SKB65400.1
Uncharacterized membrane protein.
   
 
 0.847
SKC04600.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
  
 
 0.590
Your Current Organism:
Lachnospiraceae bacterium
NCBI taxonomy Id: 1898203
Other names: L. bacterium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.