STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB87331.1HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain-containing protein. (598 aa)    
Predicted Functional Partners:
SKB87293.1
Acyl carrier protein.
 
     0.892
SKB87318.1
methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
 
    0.878
SKB55940.1
Acyl carrier protein.
 
     0.789
SKB56531.1
Acyl carrier protein.
 
     0.789
SKB87307.1
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase.
     0.789
SKB51749.1
Acyl carrier protein.
 
     0.776
SKB87339.1
Putative sigma-54 modulation protein.
       0.426
SKB82834.1
Condensation domain-containing protein.
       0.418
Your Current Organism:
Lachnospiraceae bacterium
NCBI taxonomy Id: 1898203
Other names: L. bacterium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.