STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC00585.1Multiple sugar transport system substrate-binding protein. (481 aa)    
Predicted Functional Partners:
SKC00575.1
Multiple sugar transport system permease protein.
 
  0.978
SKC00561.1
Multiple sugar transport system permease protein.
 
  0.917
SKC06714.1
Putative aldouronate transport system permease protein.
 
 
  0.843
SKC07847.1
Arabinosaccharide transport system permease protein.
  
  0.818
SKB87682.1
Putative aldouronate transport system permease protein.
  
 
  0.804
SKB45844.1
Multiple sugar transport system substrate-binding protein.
  
  
  0.800
SKC07828.1
Arabinosaccharide transport system substrate-binding protein.
  
  
  0.797
SKC00593.1
Hypothetical protein.
 
     0.766
SKB46394.1
lactose/L-arabinose transport system permease protein.
  
  0.758
SKB72322.1
Multiple sugar transport system permease protein.
 
  0.757
Your Current Organism:
Lachnospiraceae bacterium
NCBI taxonomy Id: 1898203
Other names: L. bacterium
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