STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC06749.1Multiple sugar transport system permease protein. (300 aa)    
Predicted Functional Partners:
SKC06756.1
Multiple sugar transport system permease protein.
 
0.952
SKC06771.1
Multiple sugar transport system substrate-binding protein.
  0.952
SKC07788.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.934
SKB56431.1
Multiple sugar transport system ATP-binding protein.
 
 0.933
SKB45778.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
  0.930
SKB48714.1
Multiple sugar transport system permease protein.
 
  0.928
SKC00561.1
Multiple sugar transport system permease protein.
 
  0.925
SKB45698.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-).
 
 0.923
SKB82590.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
  0.923
SKB72309.1
Multiple sugar transport system permease protein.
 
  0.921
Your Current Organism:
Lachnospiraceae bacterium
NCBI taxonomy Id: 1898203
Other names: L. bacterium
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