STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC81425.1Hypothetical protein. (349 aa)    
Predicted Functional Partners:
SMC68599.1
Methionine synthase I (cobalamin-dependent), methyltransferase domain.
    
  0.713
SMC72887.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
  0.713
SMC81423.1
Cytidine deaminase.
       0.535
SMC81411.1
Transglutaminase-like superfamily protein.
       0.500
SMC76873.1
Aspartate kinase.
   
 
  0.438
SMC48523.1
Threonine synthase.
    
 0.426
SMC92283.1
Homoserine dehydrogenase.
    
 0.421
Your Current Organism:
Clostridiales bacterium
NCBI taxonomy Id: 1898207
Other names: C. bacterium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.