Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OCK54084.1 | OCK55410.1 | LMTR3_23205 | LMTR3_11380 | Flagellar basal-body rod protein FlgF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.446 |
| OCK55410.1 | OCK54084.1 | LMTR3_11380 | LMTR3_23205 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar basal-body rod protein FlgF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | 0.446 |
| OCK55410.1 | OCK55411.1 | LMTR3_11380 | LMTR3_11385 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.412 |
| OCK55410.1 | OCK57483.1 | LMTR3_11380 | LMTR3_07915 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |
| OCK55410.1 | OCK57930.1 | LMTR3_11380 | LMTR3_02260 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.507 |
| OCK55410.1 | OCK60430.1 | LMTR3_11380 | LMTR3_27250 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.445 |
| OCK55410.1 | OCK60441.1 | LMTR3_11380 | LMTR3_27330 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family. | 0.447 |
| OCK55410.1 | OCK61919.1 | LMTR3_11380 | LMTR3_31960 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cyclohexadienyl dehydrogenase; Dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.478 |
| OCK55410.1 | apt | LMTR3_11380 | LMTR3_07540 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.459 |
| OCK55410.1 | gpt | LMTR3_11380 | LMTR3_10760 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily. | 0.459 |
| OCK55411.1 | OCK55410.1 | LMTR3_11385 | LMTR3_11380 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
| OCK57483.1 | OCK55410.1 | LMTR3_07915 | LMTR3_11380 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |
| OCK57930.1 | OCK55410.1 | LMTR3_02260 | LMTR3_11380 | Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.507 |
| OCK57930.1 | OCK61919.1 | LMTR3_02260 | LMTR3_31960 | Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cyclohexadienyl dehydrogenase; Dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.861 |
| OCK57930.1 | apt | LMTR3_02260 | LMTR3_07540 | Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.721 |
| OCK57930.1 | gpt | LMTR3_02260 | LMTR3_10760 | Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily. | 0.721 |
| OCK60430.1 | OCK55410.1 | LMTR3_27250 | LMTR3_11380 | Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.445 |
| OCK60430.1 | OCK61919.1 | LMTR3_27250 | LMTR3_31960 | Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cyclohexadienyl dehydrogenase; Dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.574 |
| OCK60441.1 | OCK55410.1 | LMTR3_27330 | LMTR3_11380 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family. | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |
| OCK61919.1 | OCK55410.1 | LMTR3_31960 | LMTR3_11380 | Cyclohexadienyl dehydrogenase; Dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: Protein Homology. | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.478 |
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