STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCK56986.1Beta-(1-6) glucans synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)    
Predicted Functional Partners:
OCK56985.1
Beta-1-3, beta-1-6-glucan biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.632
OCK56973.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.559
OCK61227.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.541
OCK56984.1
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.495
OCK57578.1
Oligosaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.492
OCK60303.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
OCK59389.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.471
OCK61556.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.459
OCK62165.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.455
OCK62197.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.428
Your Current Organism:
Bradyrhizobium sp. LMTR3
NCBI taxonomy Id: 189873
Other names: B. sp. LMTR 3, Bradyrhizobium sp. LMTR 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.