STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCK61264.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (366 aa)    
Predicted Functional Partners:
OCK61263.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
LMTR3_23945
Hypothetical protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.805
OCK59975.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.712
OCK54157.1
Nodulation protein NolL; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.710
OCK61825.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.696
OCK61358.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.691
OCK53905.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.685
OCK54252.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.663
OCK53909.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.638
OCK61359.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.631
Your Current Organism:
Bradyrhizobium sp. LMTR3
NCBI taxonomy Id: 189873
Other names: B. sp. LMTR 3, Bradyrhizobium sp. LMTR 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.