OCK60414.1 protein (Bradyrhizobium sp. LMTR3)

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

OCK60414.1

Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)

Predicted Functional Partners:

OCK60483.1

0.993

OCK60416.1

0.991

OCK60415.1

0.982

OCK60413.1

0.972

OCK61733.1

0.879

OCK54281.1

0.879

OCK58376.1

0.878

OCK53569.1

0.877

OCK55315.1

0.875

OCK54833.1

0.874

Your Current Organism:

Bradyrhizobium sp. LMTR3

NCBI taxonomy Id: 189873
Other names: B. sp. LMTR 3, Bradyrhizobium sp. LMTR 3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OCK53569.1	OCK60414.1	LMTR3_28080	LMTR3_27160	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
OCK53569.1	OCK60415.1	LMTR3_28080	LMTR3_27165	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.695
OCK53569.1	OCK60416.1	LMTR3_28080	LMTR3_27170	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.588
OCK53569.1	OCK60483.1	LMTR3_28080	LMTR3_27150	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.527
OCK54281.1	OCK60414.1	LMTR3_25660	LMTR3_27160	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.879
OCK54281.1	OCK60415.1	LMTR3_25660	LMTR3_27165	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.699
OCK54281.1	OCK60416.1	LMTR3_25660	LMTR3_27170	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.615
OCK54281.1	OCK60483.1	LMTR3_25660	LMTR3_27150	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.437
OCK54833.1	OCK60414.1	LMTR3_08495	LMTR3_27160	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.874
OCK54833.1	OCK60415.1	LMTR3_08495	LMTR3_27165	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.605
OCK54833.1	OCK60416.1	LMTR3_08495	LMTR3_27170	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.526
OCK54833.1	OCK60483.1	LMTR3_08495	LMTR3_27150	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
OCK55315.1	OCK60414.1	LMTR3_10815	LMTR3_27160	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
OCK55315.1	OCK60415.1	LMTR3_10815	LMTR3_27165	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.649
OCK55315.1	OCK60416.1	LMTR3_10815	LMTR3_27170	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.558
OCK55315.1	OCK60483.1	LMTR3_10815	LMTR3_27150	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.521
OCK58376.1	OCK60414.1	LMTR3_21450	LMTR3_27160	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.878
OCK58376.1	OCK60415.1	LMTR3_21450	LMTR3_27165	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.692
OCK58376.1	OCK60416.1	LMTR3_21450	LMTR3_27170	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.595
OCK58376.1	OCK60483.1	LMTR3_21450	LMTR3_27150	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.512