STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_0154KEGG: mmc:Mmcs_0145 hypothetical protein. (132 aa)    
Predicted Functional Partners:
Mkms_0151
KEGG: mmc:Mmcs_0142 hypothetical protein.
       0.696
Mkms_0153
O-methyltransferase, family 3; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; O-methyltransferase, family 3; conserved hypothetical protein 95; KEGG: mmc:Mmcs_0144 O-methyltransferase, family 3.
       0.696
Mkms_0152
KEGG: mmc:Mmcs_0143 hypothetical protein.
       0.695
Mkms_0149
Acylglycerol lipase; PFAM: alpha/beta hydrolase fold; KEGG: mmc:Mmcs_0140 acylglycerol lipase.
       0.681
Mkms_0150
KEGG: mmc:Mmcs_0141 putative secreted protein.
       0.681
Mkms_1524
KEGG: mmc:Mmcs_1501 hypothetical protein.
  
     0.516
Mkms_0148
RNA polymerase, sigma subunit, ECF family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: mmc:Mmcs_0139 RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily.
       0.506
Mkms_4149
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: mmc:Mmcs_4073 NAD-dependent epimerase/dehydratase.
 
     0.410
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.