STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_0236KEGG: mmc:Mmcs_0226 putative conserved transmembrane protein. (1384 aa)    
Predicted Functional Partners:
Mkms_2263
KEGG: mmc:Mmcs_2217 putative conserved integral membrane protein.
  
  
 0.990
Mkms_0230
KEGG: mmc:Mmcs_0220 hypothetical protein.
 
   
 0.952
Mkms_5104
KEGG: mmc:Mmcs_5016 hypothetical protein.
 
   
 0.863
Mkms_5090
KEGG: mmc:Mmcs_5002 putative conserved transmembrane protein.
  
   
 0.829
Mkms_0228
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_0218 methyltransferase type 11; Belongs to the methyltransferase superfamily.
  
 0.805
Mkms_0231
KEGG: mmc:Mmcs_0221 hypothetical protein.
 
   
 0.763
Mkms_4407
KEGG: mmc:Mmcs_4321 hypothetical protein.
 
   
 0.744
Mkms_3527
KEGG: mmc:Mmcs_3464 FAD dependent oxidoreductase.
  
     0.711
Mkms_0237
KEGG: mmc:Mmcs_0227 small secreted protein.
       0.673
Mkms_0229
PFAM: glycosyl transferase, group 1; KEGG: mmc:Mmcs_0219 glycosyl transferase, group 1.
 
   
 0.671
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.