STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_0812KEGG: mmc:Mmcs_0797 hypothetical protein. (160 aa)    
Predicted Functional Partners:
Mkms_0811
PFAM: protein of unknown function DUF344; KEGG: mmc:Mmcs_0796 protein of unknown function DUF344.
       0.773
Mkms_0813
KEGG: mmc:Mmcs_0798 hypothetical protein.
       0.773
Mkms_0184
KEGG: mmc:Mmcs_0175 hypothetical protein.
  
     0.694
Mkms_0814
KEGG: mmc:Mmcs_0799 hypothetical protein.
       0.642
Mkms_0815
KEGG: mmc:Mmcs_0800 hypothetical protein.
       0.642
Mkms_0086
KEGG: mmc:Mmcs_0077 putative conserved membrane protein.
  
     0.603
Mkms_4108
KEGG: mmc:Mmcs_4033 hypothetical protein.
  
     0.575
Mkms_0082
PFAM: protein of unknown function DUF571; KEGG: mmc:Mmcs_0073 protein of unknown function DUF571.
  
     0.568
Mkms_2515
KEGG: mmc:Mmcs_2470 conserved hypothetical alanine and proline rich protein.
  
     0.544
Mkms_2213
PFAM: LGFP repeat protein; KEGG: mmc:Mmcs_2167 LGFP.
  
     0.538
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.