STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_0893PFAM: luciferase family protein; KEGG: mmc:Mmcs_0876 luciferase-like protein. (300 aa)    
Predicted Functional Partners:
Mkms_5018
KEGG: mmc:Mmcs_4930 luciferase-like protein.
  
     0.749
Mkms_2675
PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mmc:Mmcs_2630 hypothetical protein.
  
   
 0.677
fbiA
LPPG:FO 2-phospho-L-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP.
 
   
 0.675
Mkms_2362
PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mmc:Mmcs_2315 hypothetical protein.
  
   
 0.672
Mkms_4029
PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mmc:Mmcs_3955 hypothetical protein.
  
   
 0.657
Mkms_3804
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3731 luciferase-like protein.
  
     0.653
Mkms_0763
PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mmc:Mmcs_0749 hypothetical protein.
  
   
 0.652
Mkms_3144
PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mmc:Mmcs_3084 hypothetical protein.
  
   
 0.648
Mkms_4766
PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mmc:Mmcs_4680 hypothetical protein.
  
   
 0.641
fbiB
Coenzyme F420-0 gamma-glutamyl ligase; Bifunctional enzyme that catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L- lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives, and the FMNH2- dependent reduction of dehydro-F420-0 to form F420-0. In the N-terminal section; belongs to the CofE family.
 
  
 0.635
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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