STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_0958KEGG: mmc:Mmcs_0941 hypothetical protein. (311 aa)    
Predicted Functional Partners:
Mkms_0957
KEGG: mmc:Mmcs_0940 acetyltransferase (isoleucine patch superfamily)-like protein.
     
 0.792
Mkms_1312
PFAM: sugar transferase; KEGG: mmc:Mmcs_1295 undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.686
Mkms_1318
PFAM: sugar transferase; KEGG: mmc:Mmcs_1301 undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.686
Mkms_3657
PFAM: sugar transferase; KEGG: mmc:Mmcs_3584 undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.686
Mkms_0959
TIGRFAM: methyltransferase FkbM family; KEGG: mmc:Mmcs_0942 methyltransferase FkbM.
  
  
 0.567
fcl
NAD-dependent epimerase/dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 
  
 0.534
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
   
 0.499
Mkms_0956
PFAM: O-antigen polymerase; KEGG: mmc:Mmcs_0939 O-antigen polymerase.
  
  
 0.427
Mkms_5081
PFAM: ABC-2 type transporter; KEGG: mmc:Mmcs_4993 ABC-2 type transporter.
  
  
 0.424
Mkms_1081
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.423
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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