STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_1374TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: mmc:Mmcs_1356 choline/carnitine/betaine transport; Belongs to the BCCT transporter (TC 2.A.15) family. (582 aa)    
Predicted Functional Partners:
Mkms_1375
KEGG: mmc:Mmcs_1357 hypothetical protein.
       0.767
Mkms_1376
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_1358 ferredoxin.
     
 0.668
pat
Aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.647
Mkms_1373
Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: mmc:Mmcs_1355 protein of unknown function UPF0089; Belongs to the long-chain O-acyltransferase family.
       0.604
Mkms_1909
TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: mmc:Mmcs_1862 amino acid carrier protein.
 
   
 0.547
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.
   
  
 0.522
Mkms_1377
PFAM: fatty acid desaturase; KEGG: mmc:Mmcs_1359 fatty acid desaturase.
       0.483
mscL
Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
     
 0.472
Mkms_4676
PFAM: histidine triad (HIT) protein; KEGG: mmc:Mmcs_4588 histidine triad (HIT) protein.
     
 0.464
Mkms_3006
PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_2962 AMP-dependent synthetase and ligase.
  
  
 0.435
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.