STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_1513KEGG: mmc:Mmcs_1491 hypothetical protein. (305 aa)    
Predicted Functional Partners:
Mkms_1514
KEGG: mmc:Mmcs_1492 hypothetical protein.
       0.794
Mkms_1512
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1490 transcriptional regulator, TetR family.
 
   
 0.705
Mkms_3723
PFAM: regulatory protein, MerR; KEGG: mmc:Mmcs_3650 transcriptional regulator, MerR family.
 
     0.618
Mkms_4549
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_4462 4Fe-4S ferredoxin, iron-sulfur binding protein.
 
    0.544
Mkms_4579
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_4492 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein.
 
  
 0.503
Mkms_1539
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_1516 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein.
 
  
 0.486
Mkms_1423
KEGG: mmc:Mmcs_1405 hypothetical protein.
  
     0.475
Mkms_2486
PFAM: protein of unknown function DUF59; KEGG: mmc:Mmcs_2441 protein of unknown function DUF59.
  
  
 0.450
Mkms_2560
KEGG: mmc:Mmcs_2515 hypothetical protein.
  
     0.439
Mkms_3498
PFAM: acyl-CoA oxidase domain protein; acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_3435 acyl-CoA dehydrogenase-like protein.
  
     0.433
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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