STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_1563KEGG: mmc:Mmcs_1540 hypothetical protein. (150 aa)    
Predicted Functional Partners:
Mkms_1562
PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_1539 MaoC-like dehydratase.
 
 0.995
Mkms_0936
PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_0919 MaoC-like dehydratase.
 
 
 0.950
Mkms_3273
PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_3211 MaoC-like dehydratase.
 
 
 0.950
Mkms_5413
PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_5324 MaoC-like dehydratase.
 
 
 0.922
Mkms_1564
Thiolase; KEGG: mmc:Mmcs_1541 thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.918
Mkms_1522
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_1499 short-chain dehydrogenase/reductase SDR.
 
 0.704
Mkms_0935
KEGG: mmc:Mmcs_0918 hypothetical protein; Belongs to the UPF0336 family.
 
  
 0.676
Mkms_5148
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.668
Mkms_0222
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_0212 acyl-CoA dehydrogenase-like protein.
 
 0.610
rpsH
SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.
   
  
 0.607
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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