STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_1688TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmc:Mmcs_1664 drug resistance transporter EmrB/QacA subfamily. (486 aa)    
Predicted Functional Partners:
Mkms_1689
PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_1665 transcriptional regulator, MarR family.
 
   
 0.820
Mkms_1687
PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_1663 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.521
Mkms_0058
KEGG: mmc:Mmcs_0049 hypothetical protein.
    
 0.462
Mkms_1118
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: mmc:Mmcs_1101 ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter.
   
 0.452
Mkms_4515
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mmc:Mmcs_4428 ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter.
   
 0.452
Mkms_0512
KEGG: mmc:Mmcs_0501 hypothetical protein.
 
     0.439
Mkms_1691
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mmc:Mmcs_1667 aromatic-ring-hydroxylating dioxygenase, beta subunit.
       0.438
Mkms_0116
KEGG: mmc:Mmcs_0107 hypothetical protein.
    
  0.430
Mkms_0422
KEGG: mmc:Mmcs_0413 hypothetical protein.
    
  0.430
Mkms_1556
KEGG: mmc:Mmcs_1533 hypothetical protein.
    
  0.430
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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