STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_1867PFAM: LysR, substrate-binding; KEGG: mmc:Mmcs_1820 transcriptional regulator, LysR family. (237 aa)    
Predicted Functional Partners:
Mkms_1866
KEGG: mmc:Mmcs_1819 hypothetical protein.
 
   
 0.913
Mkms_0625
PFAM: phosphoesterase, PA-phosphatase related; KEGG: mmc:Mmcs_0612 phosphoesterase, PA-phosphatase related.
  
   
 0.574
Mkms_1643
Putative PAS/PAC sensor protein; PFAM: PAS fold-3 domain protein; KEGG: mmc:Mmcs_1618 PAS fold-3.
  
   
 0.521
Mkms_2799
PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_2755 carboxymuconolactone decarboxylase.
 
 
 
 0.494
Mkms_2980
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mmc:Mmcs_2936 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III C terminal.
 
    0.470
Mkms_5202
Putative PAS/PAC sensor protein; PFAM: ANTAR domain protein; PAS fold-3 domain protein; KEGG: mmc:Mmcs_5113 response regulator receiver and ANTAR domain protein.
  
   
 0.463
Mkms_4046
KEGG: mmc:Mmcs_3972 hypothetical protein.
  
     0.449
Mkms_1865
KEGG: mmc:Mmcs_1818 putative transmembrane protein.
       0.448
Mkms_5273
Putative PAS/PAC sensor protein; PFAM: ANTAR domain protein; PAS fold-3 domain protein; KEGG: mmc:Mmcs_5184 putative PAS/PAC sensor protein.
  
   
 0.446
Mkms_3679
SMART: HNH nuclease; KEGG: mmc:Mmcs_3606 HNH nuclease.
  
  
 0.429
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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