STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_1959PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mmc:Mmcs_1913 amidohydrolase. (409 aa)    
Predicted Functional Partners:
Mkms_1960
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mmc:Mmcs_1914 antibiotic biosynthesis monooxygenase.
       0.682
Mkms_3380
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mmc:Mmcs_3318 twin-arginine translocation pathway signal.
 
     0.575
Mkms_0756
PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_0742 amidohydrolase 3.
 
     0.532
Mkms_1961
PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_1915 transcriptional regulator, MarR family.
  
    0.523
Mkms_4456
PFAM: Amidohydrolase 3; KEGG: mmc:Mmcs_4369 amidohydrolase 3.
 
     0.517
Mkms_1612
hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: mmc:Mmcs_1588 pyruvate carboxyltransferase.
 
    0.439
Mkms_1872
Agmatinase; TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mmc:Mmcs_1825 agmatinase, putative; Belongs to the arginase family.
  
  
 0.415
Mkms_2303
Agmatinase; TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mmc:Mmcs_2256 agmatinase, putative; Belongs to the arginase family.
  
  
 0.415
Mkms_2778
Agmatinase; KEGG: mmc:Mmcs_2734 agmatinase, putative; TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
  
  
 0.415
Mkms_3083
Agmatinase; TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mmc:Mmcs_3024 agmatinase, putative; Belongs to the arginase family.
  
  
 0.415
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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