STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mkms_2059PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2013 transcriptional regulator, TetR family. (173 aa)    
Predicted Functional Partners:
Mkms_1838
KEGG: mmc:Mmcs_1791 hypothetical protein.
  
     0.638
Mkms_3761
KEGG: mmc:Mmcs_3688 hypothetical protein.
 
     0.631
Mkms_3729
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3656 amidohydrolase 2.
  
     0.621
Mkms_2347
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2300 transcriptional regulator, TetR family.
  
     0.615
Mkms_3839
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3766 amidohydrolase 2.
  
     0.606
Mkms_2799
PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_2755 carboxymuconolactone decarboxylase.
 
     0.585
Mkms_4510
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_4423 transcriptional regulator, TetR family.
  
     0.571
Mkms_2060
PFAM: cytochrome P450; KEGG: mmc:Mmcs_2014 cytochrome P450.
       0.562
Mkms_0341
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_0331 putative transcriptional regulator, TetR family.
  
    0.555
Mkms_1821
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_1774 amidohydrolase 2.
  
     0.548
Your Current Organism:
Mycobacterium sp. KMS
NCBI taxonomy Id: 189918
Other names: M. sp. KMS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.